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ONTOLOGY REPORT - ANNOTATIONS

Term:axoneme assembly
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Accession:GO:0035082 term browser browse the term
Definition:The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: ciliary axoneme assembly;   cilium axoneme assembly;   flagellar axoneme assembly;   flagellum axoneme assembly
 related_synonym: axoneme biogenesis;   cilium axoneme biogenesis
 alt_id: GO:0035083;   GO:0035084

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axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK7 adenylate kinase 7 acts_upstream_of_or_within ISO (PMID:18776131) MGI PMID:18776131 NCBI chr24:74,275,451...74,376,032
Ensembl chr24:74,275,637...74,377,562 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24947469) Ensembl
MGI		 PMID:24947469 GO_REF:0000107 NCBI chr27:34,625,701...34,761,873
Ensembl chr27:34,625,105...34,761,745 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26387594) InterPro
MGI
TreeGrafter		 PMID:26387594 GO_REF:0000002 GO_REF:0000118 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CLUAP1 clusterin associated protein 1 acts_upstream_of_or_within ISO (PMID:23742838) MGI PMID:23742838 NCBI chr 5:3,196,257...3,236,912 JBrowse link
G CPLANE2 ciliogenesis and planar polarity effector complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29038301) Ensembl
MGI		 PMID:29038301 GO_REF:0000107 NCBI chr20:116,067,791...116,073,844
Ensembl chr20:116,068,092...116,076,905 		JBrowse link
G DCX doublecortin involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:99,106,291...99,220,479
Ensembl chr  X:99,120,505...99,220,237 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (PMID:34169321) MGI PMID:34169321 NCBI chr14:81,188,261...81,245,064 JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:45,536,973...45,544,331
Ensembl chr16:45,539,510...45,544,299 		JBrowse link
G GAS8 growth arrest specific 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27472056) Ensembl
MGI		 PMID:27472056 GO_REF:0000107 NCBI chr 5:75,353,493...75,370,012
Ensembl chr 5:75,354,117...75,371,796 		JBrowse link
G HOATZ HOATZ cilia and flagella associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,848,372...102,874,876
Ensembl chr 1:102,848,429...102,875,013 		JBrowse link
G IFT56 intraflagellar transport 56 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:107,863,335...107,927,637
Ensembl chr21:107,864,275...107,927,736 		JBrowse link
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23906841) Ensembl
MGI
TreeGrafter		 PMID:23906841 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:114,275,896...114,354,819
Ensembl chr 1:114,276,335...114,352,816 		JBrowse link
G LOC103216748 cilia- and flagella-associated protein 46 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:125,395,431...125,530,296
Ensembl chr 9:125,396,428...125,530,178 		JBrowse link
G LOC103217787 sperm-associated antigen 16 protein involved_in ISO (PMID:17699735) GO_Central PMID:17699735 NCBI chr10:99,044,097...100,215,884 JBrowse link
G LRGUK leucine rich repeats and guanylate kinase domain containing involved_in ISO (MGI:5645720|PMID:25781171) UniProt PMID:25781171 MGI:5645720 NCBI chr21:102,753,877...102,884,558
Ensembl chr21:102,755,344...102,884,003 		JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein acts_upstream_of_or_within ISO (PMID:16311594) MGI PMID:16311594 NCBI chr  X:12,222,396...12,256,802
Ensembl chr  X:12,222,760...12,256,557 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr12:2,669,623...2,674,929
Ensembl chr12:2,670,241...2,675,646 		JBrowse link
G PIERCE2 piercer of microtubule wall 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr26:28,023,735...28,029,095
Ensembl chr26:28,023,603...28,028,929 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:50,743,699...50,837,089
Ensembl chr 8:50,627,957...50,685,911
Ensembl chr 8:50,627,957...50,685,911 		JBrowse link
G RP1L1 RP1 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:8,479,768...8,499,497 JBrowse link
G RSPH1 radial spoke head component 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:86,348,365...86,371,908
Ensembl chr 2:86,348,056...86,371,858 		JBrowse link
G RSPH4A radial spoke head component 4A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH6A radial spoke head 6 homolog A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:39,248,127...39,264,752 JBrowse link
G RSPH9 radial spoke head component 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
G SPACA9 sperm acrosome associated 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,250,367...5,263,194
Ensembl chr12:5,250,063...5,263,186 		JBrowse link
G STK36 serine/threonine kinase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:104,575,944...104,606,923
Ensembl chr10:104,576,666...104,607,946 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO (PMID:20498047) MGI PMID:20498047 NCBI chr19:25,576,525...25,616,413
Ensembl chr19:25,576,379...25,616,328 		JBrowse link
G ULK4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:27445138) MGI PMID:27445138 NCBI chr22:2,731,174...3,398,885
Ensembl chr22:2,731,308...3,398,912 		JBrowse link
axonemal central apparatus assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFAP91 cilia and flagella associated protein 91 involved_in ISO (PMID:32161152) UniProt PMID:32161152 NCBI chr22:61,057,893...61,117,623
Ensembl chr22:61,054,817...61,117,587 		JBrowse link
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:65,211,142...65,233,948
Ensembl chr 1:65,217,224...65,235,556 		JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18250199) TreeGrafter
MGI		 PMID:18250199 GO_REF:0000118 NCBI chr 5:53,950,286...54,435,770
Ensembl chr 5:53,950,886...54,335,689 		JBrowse link
G RSPH9 radial spoke head component 9 involved_in ISO (MGI:6451324|PMID:30383886) UniProt PMID:30383886 MGI:6451324 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
G SPAG17 sperm associated antigen 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23418344) TreeGrafter
MGI		 PMID:23418344 GO_REF:0000118 NCBI chr20:15,545,340...15,780,126
Ensembl chr20:15,579,532...15,767,354 		JBrowse link
G SPEF1 sperm flagellar 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:34,462,933...34,467,575
Ensembl chr 2:34,462,896...34,466,923 		JBrowse link
axonemal dynein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:72,004,087...72,061,889 JBrowse link
G CCDC65 coiled-coil domain containing 65 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr11:45,146,225...45,166,152
Ensembl chr11:45,147,199...45,165,761 		JBrowse link
G CFAP57 cilia and flagella associated protein 57 acts_upstream_of_or_within ISO (PMID:36752199) MGI PMID:36752199 NCBI chr20:89,550,902...89,625,688
Ensembl chr20:89,551,069...89,625,474 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in ISO (PMID:23527195) UniProt PMID:23527195 NCBI chr 8:127,010,303...127,103,343
Ensembl chr 8:127,008,619...127,103,300 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr24:26,665,286...26,674,345
Ensembl chr24:26,665,106...26,674,063 		JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:95,033,237...95,070,766
Ensembl chr  X:95,041,169...95,070,927 		JBrowse link
G DNAI4 dynein axonemal intermediate chain 4 involved_in ISO (MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:6436377 NCBI chr20:66,189,698...66,295,628
Ensembl chr20:66,189,723...66,294,478 		JBrowse link
G DRC1 dynein regulatory complex subunit 1 involved_in ISO (PMID:23354437) UniProt PMID:23354437 NCBI chr14:81,188,261...81,245,064 JBrowse link
G DRC1 dynein regulatory complex subunit 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr14:81,199,498...81,244,663 JBrowse link
G LOC103235293 dynein assembly factor 3, axonemal involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:47,753,085...47,762,340
Ensembl chr 6:47,753,062...47,762,238 		JBrowse link
G SPAG1 sperm associated antigen 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:95,008,812...95,093,315
Ensembl chr 8:95,013,250...95,092,451 		JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:104,675,076...104,742,326
Ensembl chr 1:104,675,768...104,731,843 		JBrowse link
inner dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29317443)
(PMID:23255504)		 Ensembl
MGI
TreeGrafter
SYSCILIA_CCNET
InterPro		 PMID:23255504 PMID:29317443 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr15:8,730,456...8,789,379
Ensembl chr15:8,731,278...8,788,523 		JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23255504) SYSCILIA_CCNET
Ensembl		 PMID:23255504 GO_REF:0000107 NCBI chr16:72,004,087...72,061,889 JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in ISO (PMID:23122589) BHF-UCL PMID:23122589 NCBI chr 8:127,010,303...127,103,343
Ensembl chr 8:127,008,619...127,103,300 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 acts_upstream_of_or_within ISO (PMID:23525783) MGI PMID:23525783 NCBI chr24:26,665,286...26,674,345
Ensembl chr24:26,665,106...26,674,063 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in ISO (MGI:5544549|PMID:23872636)
(PMID:23872636)		 UniProt PMID:23872636 MGI:5544549 NCBI chr26:27,946,092...28,024,495 JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr26:27,960,224...28,013,105 JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in ISO (PMID:25232951) UniProt PMID:25232951 NCBI chr28:20,785,240...20,839,784 JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr28:20,785,242...20,836,461 JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,033,237...95,070,766
Ensembl chr  X:95,041,169...95,070,927 		JBrowse link
G DNAH1 dynein axonemal heavy chain 1 acts_upstream_of_or_within ISO (PMID:24360805) SYSCILIA_CCNET PMID:24360805 NCBI chr22:13,678,132...13,764,988
Ensembl chr22:13,683,487...13,764,937 		JBrowse link
G DNAH2 dynein axonemal heavy chain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,097,581...7,220,263
Ensembl chr16:7,103,152...7,220,397 		JBrowse link
G DNAH7 dynein axonemal heavy chain 7 acts_upstream_of_or_within ISO (PMID:11877439) SYSCILIA_CCNET PMID:11877439 NCBI chr10:81,272,913...81,615,943
Ensembl chr10:81,269,432...81,604,013 		JBrowse link
G DNAI3 dynein axonemal intermediate chain 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:48,214,391...48,289,037
Ensembl chr20:48,214,389...48,288,196 		JBrowse link
G TEKT2 tektin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15340058) Ensembl
MGI		 PMID:15340058 GO_REF:0000107 NCBI chr20:96,768,427...96,772,462
Ensembl chr20:96,768,320...96,772,233 		JBrowse link
G ZMYND10 zinc finger MYND-type containing 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29916806) Ensembl
MGI
TreeGrafter		 PMID:29916806 GO_REF:0000107 GO_REF:0000118 NCBI chr22:11,728,792...11,734,252
Ensembl chr22:11,728,795...11,733,726 		JBrowse link
outer dynein arm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC103 coiled-coil domain containing 103 involved_in ISO (PMID:22581229) BHF-UCL PMID:22581229 NCBI chr16:61,502,337...61,505,872
Ensembl chr16:61,502,495...61,505,668 		JBrowse link
G CCDC63 coiled-coil domain containing 63 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:106,089,480...106,151,071
Ensembl chr11:106,096,208...106,151,012 		JBrowse link
G CFAP410 cilia and flagella associated protein 410 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:88,065,948...88,074,820
Ensembl chr 2:88,063,604...88,075,289 		JBrowse link
G DAW1 dynein assembly factor with WD repeats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28289722) Ensembl
MGI		 PMID:28289722 GO_REF:0000107 NCBI chr10:113,890,514...113,948,610
Ensembl chr10:113,890,976...113,948,761 		JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,554,454...69,586,476
Ensembl chr 5:69,554,578...69,586,365 		JBrowse link
G DNAAF11 dynein axonemal assembly factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27353389) TreeGrafter
MGI		 PMID:27353389 GO_REF:0000118 NCBI chr 8:127,010,303...127,103,343
Ensembl chr 8:127,008,619...127,103,300 		JBrowse link
G DNAAF2 dynein axonemal assembly factor 2 acts_upstream_of_or_within ISO (PMID:23525783) MGI PMID:23525783 NCBI chr24:26,665,286...26,674,345
Ensembl chr24:26,665,106...26,674,063 		JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in ISO (PMID:23872636)
(MGI:5544549|PMID:23872636)		 UniProt PMID:23872636 MGI:5544549 NCBI chr26:27,946,092...28,024,495 JBrowse link
G DNAAF4 dynein axonemal assembly factor 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr26:27,960,224...28,013,105 JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in ISO (PMID:23040496), (PMID:25232951) UniProt PMID:23040496 PMID:25232951 NCBI chr28:20,785,240...20,839,784 JBrowse link
G DNAAF5 dynein axonemal assembly factor 5 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr28:20,785,242...20,836,461 JBrowse link
G DNAAF6 dynein axonemal assembly factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:95,033,237...95,070,766
Ensembl chr  X:95,041,169...95,070,927 		JBrowse link
G DNAH17 dynein axonemal heavy chain 17 involved_in ISO (PMID:31178125) UniProt PMID:31178125 NCBI chr16:70,422,079...70,571,126
Ensembl chr16:70,422,632...70,568,535 		JBrowse link
G DNAH5 dynein axonemal heavy chain 5 acts_upstream_of_or_within ISO (PMID:11062149), (PMID:11788826), (PMID:15750039), (PMID:16627867), (PMID:18950741), (PMID:22499950), (PMID:23261302) SYSCILIA_CCNET PMID:11062149 PMID:11788826 PMID:15750039 PMID:16627867 PMID:18950741 More... NCBI chr 4:13,401,980...13,718,900
Ensembl chr 4:13,401,092...13,652,755 		JBrowse link
G DNAI1 dynein axonemal intermediate chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11231901), (PMID:15750039), (PMID:16858015), (PMID:18950741) Ensembl
TreeGrafter
SYSCILIA_CCNET		 PMID:11231901 PMID:15750039 PMID:16858015 PMID:18950741 GO_REF:0000107 GO_REF:0000118 NCBI chr12:46,058,280...46,155,989
Ensembl chr12:46,090,829...46,128,839 		JBrowse link
G DNAI2 dynein axonemal intermediate chain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18950741), (PMID:23261302) Ensembl
TreeGrafter
SYSCILIA_CCNET		 PMID:18950741 PMID:23261302 GO_REF:0000107 GO_REF:0000118 NCBI chr16:47,318,477...47,348,767
Ensembl chr16:47,319,138...47,348,839 		JBrowse link
G DNAL1 dynein axonemal light chain 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:50,851,756...50,904,590
Ensembl chr24:50,868,828...50,903,859 		JBrowse link
G ODAD1 outer dynein arm docking complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:41,561,452...41,588,632
Ensembl chr 6:41,560,522...41,586,456 		JBrowse link
G ODAD2 outer dynein arm docking complex subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23849778)
(PMID:23849778), (PMID:24203976)		 Ensembl
MGI
SYSCILIA_CCNET		 PMID:23849778 PMID:24203976 GO_REF:0000107 NCBI chr 9:27,369,965...27,563,798
Ensembl chr 9:27,369,971...27,550,110 		JBrowse link
G ODAD3 outer dynein arm docking complex subunit 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25192045) InterPro
TreeGrafter
SYSCILIA_CCNET
Ensembl		 PMID:25192045 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:10,349,063...10,360,292
Ensembl chr 6:10,349,069...10,360,250 		JBrowse link
G ODAD4 outer dynein arm docking complex subunit 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:27486780) GO_Central
MGI		 PMID:27486780 NCBI chr16:64,297,983...64,333,421 JBrowse link
G TBCE tubulin folding cofactor E involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:72,544,942...72,616,716
Ensembl chr25:72,545,012...72,612,622 		JBrowse link
G ZMYND10 zinc finger MYND-type containing 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29916806) UniProt
MGI
TreeGrafter
Ensembl		 PMID:29916806 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chr22:11,728,792...11,734,252
Ensembl chr22:11,728,795...11,733,726 		JBrowse link
radial spoke assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RSPH4A radial spoke head component 4A involved_in ISO (MGI:6404703|PMID:32203505) UniProt PMID:32203505 MGI:6404703 NCBI chr13:57,175,100...57,192,184
Ensembl chr13:57,172,127...57,192,125 		JBrowse link
G RSPH9 radial spoke head component 9 involved_in ISO (MGI:6451324|PMID:30383886) UniProt PMID:30383886 MGI:6451324 NCBI chr17:28,497,793...28,520,678
Ensembl chr17:28,495,424...28,520,518 		JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARMC2 armadillo repeat containing 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:64,877,181...65,098,517
Ensembl chr13:64,876,837...65,098,116 		JBrowse link
G BBOF1 basal body orientation factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:51,234,618...51,279,537
Ensembl chr24:51,234,663...51,280,595 		JBrowse link
G BBS2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15539463) Ensembl
MGI		 PMID:15539463 GO_REF:0000107 NCBI chr 5:42,395,387...42,430,204
Ensembl chr 5:42,395,230...42,430,154 		JBrowse link
G CCDC146 coiled-coil domain containing 146 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:71,634,139...71,807,739
Ensembl chr21:71,634,069...71,807,442 		JBrowse link
G CEP131 centrosomal protein 131 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24415959) Ensembl
MGI		 PMID:24415959 GO_REF:0000107 NCBI chr16:73,138,784...73,172,677
Ensembl chr16:73,139,683...73,170,339 		JBrowse link
G CFAP157 cilia and flagella associated protein 157 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:10,418,854...10,426,739
Ensembl chr12:10,416,855...10,426,124 		JBrowse link
G CFAP206 cilia and flagella associated protein 206 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:11,885,121...11,948,315
Ensembl chr13:11,894,651...11,948,310 		JBrowse link
G CFAP43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29522859)
(PMID:31884020)		 TreeGrafter
MGI		 PMID:29522859 PMID:31884020 GO_REF:0000118 NCBI chr 9:97,179,767...97,283,267
Ensembl chr 9:97,179,647...97,283,225 		JBrowse link
G CFAP44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within		 ISO (PMID:29449551)
(PMID:29522859)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)		 UniProt
MGI		 PMID:28552195 PMID:29449551 PMID:29522859 MGI:6119337 MGI:6140851 NCBI chr22:67,415,886...67,555,881
Ensembl chr22:67,424,509...67,554,449 		JBrowse link
G CFAP47 cilia and flagella associated protein 47 involved_in ISO (PMID:33472045)
(MGI:6716514|PMID:33472045)		 UniProt PMID:33472045 MGI:6716514 NCBI chr  X:34,482,869...34,908,680 JBrowse link
G CFAP58 cilia and flagella associated protein 58 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32791035) Ensembl
MGI		 PMID:32791035 GO_REF:0000107 NCBI chr 9:97,400,284...97,510,489
Ensembl chr 9:97,409,380...97,510,661 		JBrowse link
G CFAP65 cilia and flagella associated protein 65 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:104,902,365...104,946,934
Ensembl chr10:104,902,401...104,944,401 		JBrowse link
G CFAP69 cilia and flagella associated protein 69 acts_upstream_of_or_within ISO (PMID:30415212) MGI PMID:30415212 NCBI chr21:58,617,190...58,684,179 JBrowse link
G CFAP69 cilia and flagella associated protein 69 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr21:58,617,916...58,651,867 JBrowse link
G CFAP97D1 CFAP97 domain containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:62,617,060...62,621,898
Ensembl chr16:62,617,969...62,621,424 		JBrowse link
G DNAH1 dynein axonemal heavy chain 1 involved_in ISO (PMID:24360805) UniProt PMID:24360805 NCBI chr22:13,678,132...13,764,988
Ensembl chr22:13,683,487...13,764,937 		JBrowse link
G FSIP2 fibrous sheath interacting protein 2 acts_upstream_of_or_within_positive_effect ISO (PMID:30137358), (PMID:30745215) UniProt PMID:30137358 PMID:30745215 NCBI chr10:71,304,678...71,397,762
Ensembl chr10:71,305,374...71,397,698 		JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:21337470) MGI PMID:21337470 NCBI chr 3:435,649...546,661
Ensembl chr 3:436,207...546,583 		JBrowse link
G IQCG IQ motif containing G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:91,607,639...91,675,719
Ensembl chr15:91,608,206...91,661,776 		JBrowse link
G LOC103217787 sperm-associated antigen 16 protein acts_upstream_of_or_within ISO (PMID:15328412) MGI PMID:15328412 NCBI chr10:99,044,097...100,215,884 JBrowse link
G LOC103233069 dynein regulatory complex subunit 7 involved_in ISO (MGI:6391458|PMID:31961863) UniProt PMID:31961863 MGI:6391458 NCBI chr 5:43,627,591...43,662,538
Ensembl chr 5:43,627,577...43,664,702 		JBrowse link
G MEIG1 meiosis/spermiogenesis associated 1 involved_in
acts_upstream_of
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23258628) Ensembl
MGI		 PMID:23258628 GO_REF:0000107 NCBI chr 9:14,974,886...14,993,903
Ensembl chr 9:14,987,172...14,993,926 		JBrowse link
G MNS1 meiosis specific nuclear structural 1 involved_in ISO (MGI:5318625|PMID:22396656) UniProt PMID:22396656 MGI:5318625 NCBI chr26:27,026,932...27,060,044
Ensembl chr26:27,027,827...27,059,863 		JBrowse link
G NEURL1 neuralized E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:11585928) MGI PMID:11585928 NCBI chr 9:96,542,046...96,641,912
Ensembl chr 9:96,542,473...96,639,761 		JBrowse link
G PDCL2 phosducin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:36278277) Ensembl
MGI		 PMID:36278277 GO_REF:0000107 NCBI chr 7:12,969,993...13,005,120
Ensembl chr 7:12,978,707...13,005,082 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20424323) Ensembl
MGI		 PMID:20424323 GO_REF:0000107 NCBI chr19:14,025,373...14,033,214
Ensembl chr19:14,025,742...14,030,643 		JBrowse link
G SPAG6 sperm associated antigen 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:22,119,230...22,184,374
Ensembl chr 9:22,119,281...22,184,397 		JBrowse link
G SPEF2 sperm flagellar 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21715716) TreeGrafter
MGI		 PMID:21715716 GO_REF:0000118 NCBI chr 4:34,466,825...34,652,272
Ensembl chr 4:34,466,931...34,652,289 		JBrowse link
G TBC1D21 TBC1 domain family member 21 involved_in ISO (MGI:6490732|PMID:32976492) UniProt PMID:32976492 MGI:6490732 NCBI chr26:9,599,042...9,616,305
Ensembl chr26:9,599,157...9,613,986 		JBrowse link
G TPGS1 tubulin polyglutamylase complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12242242) Ensembl
MGI		 PMID:12242242 GO_REF:0000107 NCBI chr 6:236,753...248,531
Ensembl chr 6:237,462...248,526 		JBrowse link
G TTC12 tetratricopeptide repeat domain 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:104,675,076...104,742,326
Ensembl chr 1:104,675,768...104,731,843 		JBrowse link
G TTLL1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO (PMID:20442420)
(PMID:20498047)		 MGI PMID:20442420 PMID:20498047 NCBI chr19:25,576,525...25,616,413
Ensembl chr19:25,576,379...25,616,328 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (PMID:23558686) MGI PMID:23558686 NCBI chr24:52,905,106...53,199,160
Ensembl chr24:52,905,291...53,199,136 		JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12672659) Ensembl
MGI		 PMID:12672659 GO_REF:0000107 NCBI chr23:37,180,011...37,199,250
Ensembl chr23:37,180,424...37,198,064 		JBrowse link
G ZMYND12 zinc finger MYND-type containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:90,473,006...90,498,958
Ensembl chr20:90,473,442...90,498,568 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16925
    cellular process 15887
      cellular component organization or biogenesis 6765
        cellular component biogenesis 3357
          cellular component assembly 3055
            axoneme assembly 100
              axonemal basal plate assembly 0
              axonemal central apparatus assembly 6
              axonemal dynein complex assembly + 38
              axonemal outer doublet assembly 0
              radial spoke assembly 2
              sperm axoneme assembly 35
Path 2
Term Annotations click to browse term
  biological_process 16925
    cellular process 15887
      cellular component organization or biogenesis 6765
        cellular component biogenesis 3357
          cellular component assembly 3055
            cell projection assembly 651
              plasma membrane bounded cell projection assembly 636
                cilium assembly 421
                  axoneme assembly 100
                    axonemal basal plate assembly 0
                    axonemal central apparatus assembly 6
                    axonemal dynein complex assembly + 38
                    axonemal outer doublet assembly 0
                    radial spoke assembly 2
                    sperm axoneme assembly 35
paths to the root